Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822683.1_cds_XP_016501242.1_14994
CDS Infomation

[gene=LOC107819625] [db_xref=GeneID:107819625] [protein=inositol phosphorylceramide glucuronosyltransferase 1-like] [protein_id=XP_016501242.1] [location=join(11760..12005,13394..13514,14905..15090,15343..15506,16936..17043,17325..17462,17545..17652,17907..18174,18260..18383,21970..22108)] [gbkey=CDS]
Sequence

ATGAAACCAATATTGTTAAGATTATGGATTATCTCCTTAATAATGTTTTTGTCATGTAAT
TATTGGGTAATCGGAGCTTCCAAATCTCAATCAACTGAAGAAGCTTACGTCACTCTTCTG
TACGGAGATGAGTTCTTGTTGGGTGTTAGAGTGCTTGGAAAGTCAATAAGGGAAAGTGGG
TCCACTAAAGATATGGTTGTTTTGGTCTCTGATGGAGTTTCTCAATACGCTAATGACCTC
CTTCGAGCTGATGGTTGGATTGTGGAAAAGATTAGTTTATTGTCAAACCCGAATCAAGTG
AGGCCGACGAGGTTTTGGGGCGTCTACACAAAGCTAAAAGTATTTAACATGACCAAGTAC
AAGAAAGTGGTGTATCTTGATGCTGATACTATTGTAGTAAAGAGCATTGAAGATCTATTT
AAATGTGGGAAGTTTTGTGCAAATTTAAAACATTCTGAGAGACTAAATTCTGGAGTAATG
GTGATTGAGCCATCAGAAGAGGTTTTTAAGGATATGATGAGCAAGGTGACCACTCTGCCT
TCTTACACTGGAGGTGATCAAGGTTTTCTGAACTCCTACTATGTTGGGTTTGCTAATGCG
CGTGTTTATGAGCCAAATCAGCCTTCAGATGTCTTAAATTCTAGAAAGGTCCCTGAAATG
GAGAGACTTTCTACTCTTTACAATGCTGATGTGGGCCTTTACATGCTTGCTAACAAGTGG
ATGGTAGATGAGAAAGAACTCCGAGTTATTCATTACACGTTGGGACCACTTAAACCATGG
GATTGGTGGACATCTTGGCTGTTAAAACCTGTTGACGTATGGCAGAATGTTCGGGTTCGT
CTTCAAGAATCGTTACCTGGAACTGGAGGGGGCAAAAATCCTAGAGATGAACTTCTTGTC
AAATTTTTGTTTCTGTTTCCGTTGCTTCTGATAGTATTTTGCTACTATCGATCATTTTTA
AAGACCCGATCATTGTGTGACCATGTTAGACAGCTATACTACAAGGTCAGAGCTAGAGGT
GTCCTACCTTATTCTTCCGTTCCTTCATCCACCATTGTTTCCCCTCAGCAGCCGAAGGTG
CCTGCTTTTCTGGGTGGGATATCTGTATGTGTCTGTTTTGCTGCTGTTCTGGCGTCCCTT
GGGCTTTCACTTGTAATTATCCCACGCCAAGTAATGCCGTGGACTGGTCTCCTCCTAATG
TATGAGTGGACATTTACACTTTTCTTCCTCTTGTTCGGGAGTTATTTGCACTTAATTTAT
CAATGGGGAAAGGCTGTGGCAAATCGTGCGCGACAATTTCAGGCTCATCCTGCATCTTTG
GACCATGAGTCTGGAAAAGGTCATCAGGTGCAGCAATCATGTTGTGACATTGCCGCGTGC
TACTATGGGTTAGGGATGGCATCTCTTGCAATTTTAGCCCCTGCATTGCCTAGTATTTTC
GGAATCACTGCTTTGTTTTTGAGATTAGGATTGATGGTTGTAGGAGGCCTTGTTTTAGCA
TCCTTCATGACATATGCTTCGGAGCATCTATCGATTAGATCATTTATGAGTGGCTTTGAA
GAAGGGGGCACACAAAGGAGGAGTATATGTTTCTTGTGCTGA

Peptide Sequence

PEP ID

XP_016501242.1
PEP Infomation

PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1-like [Nicotiana tabacum]
Sequence

MKPILLRLWIISLIMFLSCNYWVIGASKSQSTEEAYVTLLYGDEFLLGVRVLGKSIRESG
STKDMVVLVSDGVSQYANDLLRADGWIVEKISLLSNPNQVRPTRFWGVYTKLKVFNMTKY
KKVVYLDADTIVVKSIEDLFKCGKFCANLKHSERLNSGVMVIEPSEEVFKDMMSKVTTLP
SYTGGDQGFLNSYYVGFANARVYEPNQPSDVLNSRKVPEMERLSTLYNADVGLYMLANKW
MVDEKELRVIHYTLGPLKPWDWWTSWLLKPVDVWQNVRVRLQESLPGTGGGKNPRDELLV
KFLFLFPLLLIVFCYYRSFLKTRSLCDHVRQLYYKVRARGVLPYSSVPSSTIVSPQQPKV
PAFLGGISVCVCFAAVLASLGLSLVIIPRQVMPWTGLLLMYEWTFTLFFLLFGSYLHLIY
QWGKAVANRARQFQAHPASLDHESGKGHQVQQSCCDIAACYYGLGMASLAILAPALPSIF
GITALFLRLGLMVVGGLVLASFMTYASEHLSIRSFMSGFEEGGTQRRSICFLC

Transcript Sequence

Gene sequence data has not been registered.